Bacteria can be analysed flow cytometrically when in suspension without fluorescent staining, numerous fluorescent dyes can be used to indicate the presence of bacteria, viability, DNA content and membrane potential.
Labelling bacteria
The presence of bacteria for image analysis or interactions with mamallian cells can be acheived by labelling with FITC, Bis-oxonol dye, DiBAC4(5) or Hoechst 33342.
Viability
Bacterial viability can be assesed by commericial kits but DAPI and PI can be used to determine bacterial viability. This can be used in conjunction with Hoechst 33342
DNA content
Bacterial DNA content can be assesed by the use of Hoechst 33342 or PI on fixed bacteria.
Membrane potential
Measurement of bacterial membrane potential by Bis-oxonol is useful in combination with determination of bacterial viability giving a differential analysis.
Fluorescent Protein (FP)
Bacteria can be transfected with FPs including Cyan or CFP,Green or GFP and Yellow or YFP that can be detected by flow cytometry.







